期刊文献+

检测藻类16SrDNA特异性片段在溺死诊断中的应用 被引量:14

Value of specific 16S r DNA fragment of algae in diagnosis of drowning: an experiment with rabbits
在线阅读 下载PDF
导出
摘要 目的建立藻类16Sr DNA特异性片段扩增方法,探讨其在溺死诊断中的应用价值。方法 35只实验兔随机分组:生前入水组(溺死组)15只,死后入水组(空气栓塞致死后入水)15只,对照组(空气栓塞死后不作处理)5只;微波消解-真空抽滤-电镜扫描法检测过的20例水中尸体肝脏样本20份(硅藻阳性14份,阴性6份)。7种已知藻(直链藻、菱形藻、针杆藻、舟形藻,铜绿微囊藻,小环藻,小球藻)作为对照。提取组织样本及藻类DNA,扩增产物银染显带。结果生前入水组肺、肝、肾检出率分别为100%,86%,86%;死后入水组肺、肝、肾检出率分别为13%,0%,0%。对照组肺、肝、肾藻类未检出。生前入水组与死后入水组各种脏器中藻类检出率差异显著(P<0.05)。20份经微波消解-真空抽滤-电镜扫描法检测的水中尸体肝脏样本中,使用本方法15份样本结果为阳性(包括1份硅藻阴性样本)。7种藻类DNA扩增结果为阳性。结论本文所建立的PCR法检测藻类16Sr DNA灵敏度高,可对多种溺死藻类同时检测,有较好的应用前景。 Objective To establish a method for amplifying specific 16S rDNA fragment of algae related with drowning and test its value in drowning diagnosis. Methods Thirty-five rabbits were randomly divided into 3 the drowning group (n=15), postmortem water immersion group (n=15, subjected to air embolism before seawater immersion), and control group(n=5, with air embolism only). Twenty samples of the liver tissues from human corpses found in water were also used, including 14 diatom-positive and 6 diatom-negative samples identified by microwave digestion-vacuum filtration-automated scanning electron microscopy (MD-VF-Auto SEM). Seven known species of algae served as the control algae (Melosira sp, Nitzschia sp, Synedra sp, Navicula sp, Microcystis sp, Cyclotella meneghiniana, and Chlorella sp). The total DNA was extracted from the tissues and algae to amplify the specific fragment of algae followed by 8% polyacrylamide gelelectrophoresis and sliver-staining. Results In the drowning group, algae was detected in the lungs (100%), liver (86%), and kidney (86%); algae was detected in the lungs in 2 rabbits in the postmortem group (13%) and none in the control group. The positivity rates of algae were significantly higher in the drowning group than in the postmortem group (P〈0.05). Of the 20 tissue samples from human corps found in water, 15 were found positive for algae, including sample that had been identified as diatom-negative by MD-VF-Auto SEM. All the 7 control algae samples yielded positive results in PCR. Conclusion The PCR-based method has a high sensitivity in algae detection for drowning diagnosis and allows simultaneous detection of multiple algae species related with drowning.
出处 《南方医科大学学报》 CAS CSCD 北大核心 2015年第8期1215-1218,共4页 Journal of Southern Medical University
基金 公安部科技强警基础工作专项项目(2014GABJC020)
关键词 法医病理学 溺死 16SrDNA 藻类检验 forensic pathology drowning 16S rDNA algae
  • 相关文献

参考文献14

  • 1Piette MH.De letter E A.drowning:still a difficult autopsy diagnosis [J].Forensic Sci Int,2006,163(1/2):1-9.
  • 2Aoyagi M,Iwadate K,Fukui K,et al.A novel method for the diagnosis of drowning by detection of Aeromonas sobria with PCR method[J].Leg Med,2009,11(6):257-9.
  • 3Hu SL,Liu C,Wen JF,et al.Detection of diatoms in water and tissues by combination of microwave digestion,vacuum filtration and scanning electron microscopy[J].Forensic Sci Int,2013,226(1/3):e48-51.
  • 4Kane M,Fukunaga T,Maeda H,et al.The detection of picoplankton 16S rDNA in cases of drowning [J].Int J Legal Med,1996,108(6):323-6.
  • 5Zhao J,Liu C,Hu SL,et al.Microwave Digestion-Vacuum Filtration-Automated scanning electron microscopy as a sensitive method for forensic diatom test[J].Int J Legal Med,2013,127(2):459-63.
  • 6Tie J,Uchigasaki S,Haseba T,et al.Direct and rapid PCR amplification using digested tissues for the diagnosis of drowning [J].Electrophoresis,2010,31(14,S1):2411-5.
  • 7Kakizaki E,Ogura Y,Kozawa S,et al.Detection of diverse aquatic microbes in blood and organs of drowning victims:First metagenomic approach using high-throughput 454-pyrosequencing [J].Forensic Sci Int,2012,220(1/3):135-46.
  • 8余政梁,刘超,胡孙林,周玉,赵建,王会品,谢卫兵,王慧君.PCR-DHPLC法检测硅藻SSU基因在溺死鉴定中的应用[J].中国法医学杂志,2013,28(6):457-460. 被引量:17
  • 9Nubel U,Garcia-Pichel F,Muyzer G.PCR primers to amplify 16S rRNA genes from cyanobacteria[J].Appl Environ Microbiol,1997,63(8):3327-32.
  • 10Fox GE,Wisotzkey JD,Jurtshuk PJ.How close is close:16S rRNA sequence identity May not be sufficient to guarantee species identity [J].Int J Syst Bacteriol,1992,42(1):166-70.

二级参考文献11

  • 1吴德清,徐小虎,于晓军.硅藻的检验现状[J].中国法医学杂志,2004,19(S1):13-15. 被引量:12
  • 2马书玲,李凡,秦豪杰,莫耀南.酶法检测59例尸体脏器硅藻的结果分析[J].河南科技大学学报(医学版),2006,24(1):60-61. 被引量:3
  • 3何方刚,刘良,黄代新,杨庆恩,翟仙敦,尹慧.浮游生物16S rDNA检测在大鼠溺死鉴定中的价值[J].中国法医学杂志,2006,21(6):331-333. 被引量:11
  • 4Kane M, Fukunaga T, Maeda H, et al. The detection of picoplankton 16S rDNA in case of drowning [J]. Int J Legal Med, 1996, 108 : 323 - 326.
  • 5Nubel U, Garcia-Pichel F, Muyzer G. PCR primers to amplify 16S rRNA genes from cyanobacteria [ J ]. Appl Environ Microbiol, 1997, 63 : 3327 - 3332.
  • 6Terazawa K, Takatori T. Isolation of intact plankton from drowning lung tissue by centrifugation in a colloidal silica gradient [J]. Forensic Sci Int, 1980, 16 (1): 63-66.
  • 7Walsh P S, Metzger D A, Higuchi R, et al. Chelex-100 as a medium for simple extraction of DNA for PCR-based typing from forensic material [J]. Biotechniques, 1991, 10:506 -513.
  • 8Bassam B J, Caetano-Anolles G, Gresshoff P M. Fast and sensitive silver staining of DNA in polyacrylamide gels [ J]. Anal Biochem, 1991, 196 ( 1 ) : 80 - 83.
  • 9Rijk P, Neefs J M, Ven de Peer Y, et al. Compilation of small ribosomal subunit RNA sequences [ J ]. Nucleic Acid Res, 1992, 20 : 2075 - 2089.
  • 10Muyzer G, De Waal E C, Uitterlinden A G. Profiling of complex microbial populations by denaturing gradient gel electrophoresis analysis of polymerase chain reactionamplified genes coding for 16S rRNA [ J]. Appl Environ Microbiol, 1993, 59 : 695 - 700.

共引文献31

同被引文献118

引证文献14

二级引证文献38

相关作者

内容加载中请稍等...

相关机构

内容加载中请稍等...

相关主题

内容加载中请稍等...

浏览历史

内容加载中请稍等...
;
使用帮助 返回顶部