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三维卷积神经网络在中耳手术相关颞骨影像自动分割中的应用探索 被引量:4

Application of 3DU-net in automatic segmentation of middle ear surgery structures in temporal bone CT
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摘要 目的:研究基于三维卷积神经网络3DU-net神经网络的深度学习方法,在临床常规颞骨CT影像中,对中耳手术相关的迷路、面神经和听骨进行全自动分割的可行性。方法:随机调取门诊常规行颞骨CT检查患者的薄层CT扫描数据30例为正常结构组,既往耳蜗、面神经和听骨形态或走行变异者各1例为异常结构组。所有数据由两位临床医生在Mimics 20.0软件中,对面神经、迷路和听骨3个结构进行手工初分割和精细分割,同时利用3DU-Net对上述数据进行深度学习。分别对正常结构组中测试集5例和异常结构组中的迷路、听骨和面神经进行手工分割与自动分割的Dice相似指数(DSC)比较。结果:利用3DU-net网络结构对常规颞骨CT中迷路、听骨和面神经进行自动分割,其DSC分别为0.79±0.03、0.64±0.05和0.49±0.09;对异常的迷路、听骨和面神经的识别,其DSC也可达到0.71、0.54和0.40。结论:根据颞骨解剖特点,采用3DU-net神经网络结构,可以实现对迷路、听骨和面神经的全自动化分割,并获得接近手工分割的精度,该方法可行、快捷、准确度高。 Objective:To study the feasibility of fully automatic segmentation of labyrinth,facial nerve and ossicles in clinical routine temporal bone CT images based on 3DU-net neural network.Method:Clinical data were divided into two groups:①Normal group:data were randomly assigned from 30patients for routine temporal bone CT examination;②Abnormal group:cochlear,ossicles and facial nerve morphology variation of 1case each.The structures of facial nerve,labyrinth and ossicles were manually initial segmented and fine segmented by 2clinicians with Mimics 20.0.Three-dimensional convolutional neural network(3D U-Net)was selected to conduct deep learning on the same data.The dice similarity coefficient(DSC)was used as the evaluation index.Result:The 3DU-net neural network was used to automatically segment the labyrinth,ossicles and facial nerve in the routine temporal bone CT.In the normal group,the DSC of labyrinth,ossicles and facial nerve were 0.79±0.03,0.64±0.05and 0.49±0.09,respectively.In the abnormal group,the DSC of these structures were 0.71,0.54and 0.40.Conclusion:According to the anatomical characteristics of the temporal bone,the labyrinth,ossicles and the facial nerve can be totally automatic segmented by 3DU-net neural network,and the accuracy was closed to that of manual segmentation.This method is feasible,fast and accurate.
作者 柯嘉 吕弈 杜雅丽 王君臣 王江 孙世龙 马芙蓉 KE Jia;LV Yi;DU Yali;WANG Junchen;WANG Jiang;SUN Shilong;MA Furong(Department of Otorhinolaryngology Head and Neck Surgery,Third Hospital,Peking University,Beijing,100191,China;School of Mechanical Engineering and Automation,Beihang University)
出处 《临床耳鼻咽喉头颈外科杂志》 CAS 北大核心 2020年第10期870-873,共4页 Journal of Clinical Otorhinolaryngology Head And Neck Surgery
基金 国家自然科学基金(No:61701014,61911540075) 首都卫生发展科研专项项目资助(首发-2016-2-4094) 北京大学第三医院院临床重点项目(No:BYSY2017025)。
关键词 深度学习 卷积神经网络 中耳手术 面神经 自动分割 deep learning convolutional neural network middle ear surgery facial nerve automatic segmentation
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