Matrix-assisted Laser Desorption/Ionization with Time-of-flight Mass Spectrometry (MALDI-TOFMS) was investigated as a method for the rapid identifica-tion of species. Current demand in microbial identi-fication is how...Matrix-assisted Laser Desorption/Ionization with Time-of-flight Mass Spectrometry (MALDI-TOFMS) was investigated as a method for the rapid identifica-tion of species. Current demand in microbial identi-fication is how to compare unknown strains to the known one quickly, semi-automatically and accurately. In this paper, we present a software tool that allows flexibly microbial matching in a user-friendly way, by letting the users to customize comparison parameters including: in vitro transcription enzyme, mass tolerance,minimum fragment length, intensity threshold and corresponding weights. We provide three spectral scoring functions to compute the affin-ity between the species. Therefore, the precision of microbial comparison increases. To test and verify this tool, we employed experimental spectral data based on MALDI-TOFMS and the gene sequences of E.coli and Salmonella. This software is written in Java for cross-platform intention.展开更多
A novel sample preparation method of matrix-assisted laser desorption/ionization mass spectrometry for polystyrene was reported. Compared to the conventional dried-droplet method, the efficiency of ionization and sign...A novel sample preparation method of matrix-assisted laser desorption/ionization mass spectrometry for polystyrene was reported. Compared to the conventional dried-droplet method, the efficiency of ionization and signal intensity of mass spectra were improved. The mechanism was also analyzed.展开更多
Native and methyl-esterified sialylated glycans were analyzed with 2,4,6-trihydroxyacetophenone（THAP）and 2,5-dihydroxybenzoic acid（DHB）as matrix by a matrix-assisted laser desorption/ionization time-of-flight mass...Native and methyl-esterified sialylated glycans were analyzed with 2,4,6-trihydroxyacetophenone（THAP）and 2,5-dihydroxybenzoic acid（DHB）as matrix by a matrix-assisted laser desorption/ionization time-of-flight mass spectrometer（MALDI-TOF MS）.High quality negative-ion spectra of commercial sialylated glycan were obtained with THAP as matrix.Detection limit of the glycan was less than 0.1 pmol.After methyl esterification of sialic acid（SA）residue,sialylated glycans were detected sensitively in the positive-ion mode using DHB as matrix.Neutral and sialylated glycans from the mixture of asialofetuin and fetuin were methylesterified and simultaneously recognized in one manipulation.Methyl esterification of SA residue offers a convenient and sensitive way to identify the structure of N-linked glycans for glycan profiling.展开更多
目的了解邯郸地区3类食品中肠杆菌科细菌的污染分布与耐药情况,构建食源性肠杆菌科的污染数据库。方法采集邯郸市2023—2024年市售食药物质、特殊膳食用食品和坚果与籽类及其加工制品类食品,通过基质辅助激光解吸电离飞行时间质谱进行...目的了解邯郸地区3类食品中肠杆菌科细菌的污染分布与耐药情况,构建食源性肠杆菌科的污染数据库。方法采集邯郸市2023—2024年市售食药物质、特殊膳食用食品和坚果与籽类及其加工制品类食品,通过基质辅助激光解吸电离飞行时间质谱进行肠杆菌科分离鉴定,同时对肠杆菌科开展定量计数和药敏检测。结果196份食品中,检出肠杆菌科阳性样品22份,阳性率11.2%。散装食品中肠杆菌科检出率20.0%高于预包装食品中的检出率6.3%,差异有统计学意义(χ^(2)=8.415,P<0.05)。肠杆菌科细菌污染量总范围在1.00~4.67 lg CFU/g之间。22份阳性食品中鉴定出31株肠杆菌科细菌,其中包括9个属17种细菌。15种抗生素的药敏实验中32.26%的肠杆菌科细菌为耐药株,其中氨苄西林(25.81%)和头孢他啶(12.90%)耐药率相对较高,氯霉素、复方新诺明、粘菌素、头孢噻肟、氨苄西林/舒巴坦和四环素耐药率较低(耐药率均≤10.00%),而对厄他培南、美罗培南、头孢他啶/阿维巴坦、替加环素、环丙沙星、萘啶酸和阿米卡星的敏感率均为100.00%。散装红枣中检出1株非脱羧勒克氏菌耐抗生素种类最多。结论邯郸地区食品中存在一定程度的肠杆菌科细菌污染,散装食品明显比预包装食品污染率高,肠杆菌科细菌检出种类繁多,不同细菌耐药性差异明显,需进一步加强针对性监测工作,以防控食源性疾病。展开更多
Objective To apply two-dimensional electrophoresis and mass spectrometry in the ovary proteome researchMethods Protein extractions from mouse ovaries were run in IPGphor isoelectric focus system with 11 cm and 24 cm I...Objective To apply two-dimensional electrophoresis and mass spectrometry in the ovary proteome researchMethods Protein extractions from mouse ovaries were run in IPGphor isoelectric focus system with 11 cm and 24 cm IPG strips respectively (pH 3～10, 0.3 mm thick), then the protein spots were identified by mass spectrometry.Results The ovary protein exactions separated by two-dimensional electrophoresis have got high resolution, and identifing protein by mass spectrometry was highly efficient and facilitly. These two techniques should facilitate further investigation of female reproduction proteome research.Conclusion These two rapid high resolutions and efficient techniques have a variety of applications foreground in female reproduction proteome pattern research.展开更多
Objective To identify specific biomarkers that could improve early diagnosis of lung adenocarcinoma using matrix-assisted laser desorption/ionization (MALDI) technology. Methods Serum samples were isolated from 17 pat...Objective To identify specific biomarkers that could improve early diagnosis of lung adenocarcinoma using matrix-assisted laser desorption/ionization (MALDI) technology. Methods Serum samples were isolated from 17 patients with stage Ⅰ lung adenocarcinoma and 17 age-and sex-matched healthy controls,and the serum proteomic profiles were obtained by matrix-assisted laser desorption ionization time of flight (MALDI-TOF) mass spectrometry. Results Compared with healthy control group,two highly expressed potential biomarkers were identified with the relative molecular weights of 6 631.64 Da and 4 964.21 Da. The two best novel protein peaks were automatically chosen for the system training and the development of the constructed model. The constructed model was then used to test an independent set of masked serum samples from 15 lung adenocarcinoma patients and 22 healthy individuals. The analysis yielded a sensitivity of 93.3%,and a specificity of 95.5%. Conclusion These results suggest that MALDI-TOF-MS ProteinChip technology is a quick,convenient,and high-output analyzing method that is capable of selecting several relatively potential biomarkers from the serum of lung adenocarcinoma patients and may have a clinical value in the future,and will provide clues to identifying new serologic biomarkers of lung adenocarcinoma.展开更多
目的评价基质辅助激光解吸电离飞行时间质谱(matrix-assisted laser desorption ionization time of flight mass spectrometry,MALDI-TOF MS)在即食果蔬中微生物风险监测的应用价值,确定生菜中的危害微生物及蛋白指纹图谱特征。方法对...目的评价基质辅助激光解吸电离飞行时间质谱(matrix-assisted laser desorption ionization time of flight mass spectrometry,MALDI-TOF MS)在即食果蔬中微生物风险监测的应用价值,确定生菜中的危害微生物及蛋白指纹图谱特征。方法对成都地区50份生菜样品进行微生物的检测,对分离的嗜麦芽窄食单胞菌进行生化鉴定和MALDI-TOF MS鉴定,采用维恩分析(包括小于0.85‰偏差)对生菜中分离的嗜麦芽窄食单胞菌指纹图谱进行拟合,采用系统聚类法对分离的嗜麦芽窄食单胞菌指纹图谱进行聚类分析。结果50份生菜样品中检出11株嗜麦芽窄食单胞菌,MALDI-TOF MS获得其蛋白图谱拟合出特征性标识峰指纹图16组,与数据库中超级谱图比对有9组不同标识峰,为生菜分离菌特征峰;蛋白指纹图谱聚类结果表明嗜麦芽窄食单胞指纹图谱有一定来源指向性,但仍需更多数据修正。结论嗜麦芽窄食单胞菌在生菜中检出率较高,可作为危害风险特征微生物继续研究,MALDI-TOF MS可获得更多农产品中致病微生物特征信息,作为农产品危害识别微生物快速鉴定及差异性分析应更深入的研究和扩大数据量,并建立农产品微生物数据库系统。展开更多
基质辅助激光解吸电离飞行时间质谱(matrix assisted laser desorption ionization time of flight mass spectrometry,MALDI-TOF MS)作为近年来发展的新型食源性致病菌鉴定技术,具有灵敏、准确、检测速度快等优点,该技术为食品病原微...基质辅助激光解吸电离飞行时间质谱(matrix assisted laser desorption ionization time of flight mass spectrometry,MALDI-TOF MS)作为近年来发展的新型食源性致病菌鉴定技术,具有灵敏、准确、检测速度快等优点,该技术为食品病原微生物靶标性监测和食品安全事件应急检验提供了一种高效的鉴别技术参考,在保障民众生命健康和经济社会发展上发挥了重要作用。本文检索了近年来国内外MALDI-TOF MS技术在食源性致病菌检测中的相关研究案例,简要综述了MALDI-TOF MS检测原理、工作流程,影响鉴定结果的主要因素,介绍了MALDI-TOF MS技术应用于食源性致病菌检测中的实际案例,在此基础上分别从参考菌株数据库建设、标准化程序规范等方面对MALDI-TOF MS技术在食源性致病菌检测领域的未来研究方向进行展望,以期为后续食品安全检测及快速监管食源性致病菌污染提供技术支持。展开更多
文摘Matrix-assisted Laser Desorption/Ionization with Time-of-flight Mass Spectrometry (MALDI-TOFMS) was investigated as a method for the rapid identifica-tion of species. Current demand in microbial identi-fication is how to compare unknown strains to the known one quickly, semi-automatically and accurately. In this paper, we present a software tool that allows flexibly microbial matching in a user-friendly way, by letting the users to customize comparison parameters including: in vitro transcription enzyme, mass tolerance,minimum fragment length, intensity threshold and corresponding weights. We provide three spectral scoring functions to compute the affin-ity between the species. Therefore, the precision of microbial comparison increases. To test and verify this tool, we employed experimental spectral data based on MALDI-TOFMS and the gene sequences of E.coli and Salmonella. This software is written in Java for cross-platform intention.
文摘A novel sample preparation method of matrix-assisted laser desorption/ionization mass spectrometry for polystyrene was reported. Compared to the conventional dried-droplet method, the efficiency of ionization and signal intensity of mass spectra were improved. The mechanism was also analyzed.
基金Supported by the National Natural Science Foundation of China(30800193)Grant from Centre for International Mobility(CIMO),Finland
文摘Native and methyl-esterified sialylated glycans were analyzed with 2,4,6-trihydroxyacetophenone（THAP）and 2,5-dihydroxybenzoic acid（DHB）as matrix by a matrix-assisted laser desorption/ionization time-of-flight mass spectrometer（MALDI-TOF MS）.High quality negative-ion spectra of commercial sialylated glycan were obtained with THAP as matrix.Detection limit of the glycan was less than 0.1 pmol.After methyl esterification of sialic acid（SA）residue,sialylated glycans were detected sensitively in the positive-ion mode using DHB as matrix.Neutral and sialylated glycans from the mixture of asialofetuin and fetuin were methylesterified and simultaneously recognized in one manipulation.Methyl esterification of SA residue offers a convenient and sensitive way to identify the structure of N-linked glycans for glycan profiling.
文摘目的了解邯郸地区3类食品中肠杆菌科细菌的污染分布与耐药情况,构建食源性肠杆菌科的污染数据库。方法采集邯郸市2023—2024年市售食药物质、特殊膳食用食品和坚果与籽类及其加工制品类食品,通过基质辅助激光解吸电离飞行时间质谱进行肠杆菌科分离鉴定,同时对肠杆菌科开展定量计数和药敏检测。结果196份食品中,检出肠杆菌科阳性样品22份,阳性率11.2%。散装食品中肠杆菌科检出率20.0%高于预包装食品中的检出率6.3%,差异有统计学意义(χ^(2)=8.415,P<0.05)。肠杆菌科细菌污染量总范围在1.00~4.67 lg CFU/g之间。22份阳性食品中鉴定出31株肠杆菌科细菌,其中包括9个属17种细菌。15种抗生素的药敏实验中32.26%的肠杆菌科细菌为耐药株,其中氨苄西林(25.81%)和头孢他啶(12.90%)耐药率相对较高,氯霉素、复方新诺明、粘菌素、头孢噻肟、氨苄西林/舒巴坦和四环素耐药率较低(耐药率均≤10.00%),而对厄他培南、美罗培南、头孢他啶/阿维巴坦、替加环素、环丙沙星、萘啶酸和阿米卡星的敏感率均为100.00%。散装红枣中检出1株非脱羧勒克氏菌耐抗生素种类最多。结论邯郸地区食品中存在一定程度的肠杆菌科细菌污染,散装食品明显比预包装食品污染率高,肠杆菌科细菌检出种类繁多,不同细菌耐药性差异明显,需进一步加强针对性监测工作,以防控食源性疾病。
文摘Objective To apply two-dimensional electrophoresis and mass spectrometry in the ovary proteome researchMethods Protein extractions from mouse ovaries were run in IPGphor isoelectric focus system with 11 cm and 24 cm IPG strips respectively (pH 3～10, 0.3 mm thick), then the protein spots were identified by mass spectrometry.Results The ovary protein exactions separated by two-dimensional electrophoresis have got high resolution, and identifing protein by mass spectrometry was highly efficient and facilitly. These two techniques should facilitate further investigation of female reproduction proteome research.Conclusion These two rapid high resolutions and efficient techniques have a variety of applications foreground in female reproduction proteome pattern research.
文摘Objective To identify specific biomarkers that could improve early diagnosis of lung adenocarcinoma using matrix-assisted laser desorption/ionization (MALDI) technology. Methods Serum samples were isolated from 17 patients with stage Ⅰ lung adenocarcinoma and 17 age-and sex-matched healthy controls,and the serum proteomic profiles were obtained by matrix-assisted laser desorption ionization time of flight (MALDI-TOF) mass spectrometry. Results Compared with healthy control group,two highly expressed potential biomarkers were identified with the relative molecular weights of 6 631.64 Da and 4 964.21 Da. The two best novel protein peaks were automatically chosen for the system training and the development of the constructed model. The constructed model was then used to test an independent set of masked serum samples from 15 lung adenocarcinoma patients and 22 healthy individuals. The analysis yielded a sensitivity of 93.3%,and a specificity of 95.5%. Conclusion These results suggest that MALDI-TOF-MS ProteinChip technology is a quick,convenient,and high-output analyzing method that is capable of selecting several relatively potential biomarkers from the serum of lung adenocarcinoma patients and may have a clinical value in the future,and will provide clues to identifying new serologic biomarkers of lung adenocarcinoma.
文摘目的评价基质辅助激光解吸电离飞行时间质谱(matrix-assisted laser desorption ionization time of flight mass spectrometry,MALDI-TOF MS)在即食果蔬中微生物风险监测的应用价值,确定生菜中的危害微生物及蛋白指纹图谱特征。方法对成都地区50份生菜样品进行微生物的检测,对分离的嗜麦芽窄食单胞菌进行生化鉴定和MALDI-TOF MS鉴定,采用维恩分析(包括小于0.85‰偏差)对生菜中分离的嗜麦芽窄食单胞菌指纹图谱进行拟合,采用系统聚类法对分离的嗜麦芽窄食单胞菌指纹图谱进行聚类分析。结果50份生菜样品中检出11株嗜麦芽窄食单胞菌,MALDI-TOF MS获得其蛋白图谱拟合出特征性标识峰指纹图16组,与数据库中超级谱图比对有9组不同标识峰,为生菜分离菌特征峰;蛋白指纹图谱聚类结果表明嗜麦芽窄食单胞指纹图谱有一定来源指向性,但仍需更多数据修正。结论嗜麦芽窄食单胞菌在生菜中检出率较高,可作为危害风险特征微生物继续研究,MALDI-TOF MS可获得更多农产品中致病微生物特征信息,作为农产品危害识别微生物快速鉴定及差异性分析应更深入的研究和扩大数据量,并建立农产品微生物数据库系统。
文摘基质辅助激光解吸电离飞行时间质谱(matrix assisted laser desorption ionization time of flight mass spectrometry,MALDI-TOF MS)作为近年来发展的新型食源性致病菌鉴定技术,具有灵敏、准确、检测速度快等优点,该技术为食品病原微生物靶标性监测和食品安全事件应急检验提供了一种高效的鉴别技术参考,在保障民众生命健康和经济社会发展上发挥了重要作用。本文检索了近年来国内外MALDI-TOF MS技术在食源性致病菌检测中的相关研究案例,简要综述了MALDI-TOF MS检测原理、工作流程,影响鉴定结果的主要因素,介绍了MALDI-TOF MS技术应用于食源性致病菌检测中的实际案例,在此基础上分别从参考菌株数据库建设、标准化程序规范等方面对MALDI-TOF MS技术在食源性致病菌检测领域的未来研究方向进行展望,以期为后续食品安全检测及快速监管食源性致病菌污染提供技术支持。
